FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004151262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4272168
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC262920.6154252360862214No Hit
GTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCA185150.4333865147625281No Hit
GGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTG142140.33271163493570477No Hit
TTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCAG73700.17251194241424964No Hit
GGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGT72650.1700541738995283No Hit
GGGTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC49690.11631096904428852No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)