FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004151334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences375814
Sequences flagged as poor quality0
Sequence length76
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTA8150.21686259692294593No Hit
GGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAA7500.19956680698430604No Hit
TGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGA6110.1625804254232147No Hit
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC4370.11628092620285567No Hit
GGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAG4250.11308785729110676No Hit
GAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCT3900.10377473963183917No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)