FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004151335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences354892
Sequences flagged as poor quality0
Sequence length76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTA8190.23077443278518533No Hit
GGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAA7100.2000608635866686No Hit
TGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGA5160.14539634593059297No Hit
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC4330.12200894920144721No Hit
GGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAG3990.11242856981842364No Hit
GAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCT3690.10397529389222636No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)