FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004151363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences974761
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAA65260.6694974460406191No Hit
GGGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAG65220.6690870890402878No Hit
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC58540.6005574699849502No Hit
GGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTG53920.5531612364466777No Hit
GTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCA43060.44174931085671254No Hit
GGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGT37810.3878899545632211No Hit
GGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGC35470.3638840700438364No Hit
CGGGGGGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGG29590.303561590995126No Hit
GCGGGGGGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTG28920.29668811123957567No Hit
GGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGA20490.21020537341974085No Hit
GAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCG20180.20702510666717275No Hit
GGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAG19400.19902314516071118No Hit
TTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCAG18900.19389368265656917No Hit
GGTTAGGCTGGTGTTAGGGTTCTTTGTTTTTGGGGTTTGGCAGAGATGTG17320.1776845811434803No Hit
GCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAG15870.1628091398814684No Hit
GGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAA14900.15285798262343284No Hit
AGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGG13570.139213612362415No Hit
GGGGTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTG13540.13890584461216646No Hit
GGCTGGTGTTAGGGTTCTTTGTTTTTGGGGTTTGGCAGAGATGTGTTTAA13160.13500745310901852No Hit
GGGTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC12630.12957022285462794No Hit
AGCGGGGGGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGT11050.11336112134153911No Hit
CGGGGGAGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGA10820.11100156858963375No Hit
CGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCA10790.11069380083938525No Hit
GGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGAC10550.10823165883739706No Hit
TGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGA9910.10166594683209526No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)