FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004151372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences809524
Sequences flagged as poor quality0
Sequence length76
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30070.3714528537757991No Hit
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC17130.2116058325633335No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC16750.20691171602077268No Hit
GTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCA15010.18541760343115216No Hit
GGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAA11180.1381058498574471No Hit
GGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTG10680.13192938072249866No Hit
GGAGGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAG9600.11858820739101003No Hit
GGGAGGGGGGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAA9090.1122882088733626No Hit
GGGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGT8320.10277644640554202No Hit
TGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGA8280.10228232887474614No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)