FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004151502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1445189
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCACTGTGGTTCCTGCATGAAGACAGTGGCTGGCGGTGCCTGGACGTAC17330.11991511144909076No Hit
GGTTTGGTGAAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC15200.1051765547620415No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)