FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004151542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004151542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1090279
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTGGTGAAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC14420.13225972434578673No Hit
GGGTTTGGTGAAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTG11610.10648650483041497No Hit
GGCACTGTGGTTCCTGCATGAAGACAGTGGCTGGCGGTGCCTGGACGTAC11000.100891606643804No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)