FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004156328

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004156328
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1235285
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61940.5014227485964777No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49870.40371250359228844No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20960.16967744285731634No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)