FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004169833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004169833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40607313
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA1098640.2705522524969825No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1016840.2504080976744263No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC658580.1621826098171036No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG532580.13115371608064783No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG476450.11733108270424099No Hit

[OK]Adapter Content

Adapter graph