Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004172392 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 116493266 |
Sequences flagged as poor quality | 0 |
Sequence length | 58 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 644461 | 0.5532173851147756 | No Hit |
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 427328 | 0.36682635372245465 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCT | 342254 | 0.29379723974774646 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGCGCAGGGGC | 293791 | 0.25219569344034015 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |