FastQCFastQC Report
Fri 31 Mar 2023
EGAF00004174389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10802824
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1694931.5689693731935281No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG202640.18758058078146975No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA180490.16707668291180158No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)