FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004174482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7672531
Sequences flagged as poor quality0
Sequence length32-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2215222.8872089275364283No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA184460.24041610258726878No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG152480.19873494157273525No Hit
CCACCGCCCCCCCAGCCCACGGTGTCACCTCGGCCCCGGACACCAGGCCGGCCCCGGGCT102150.133137291983571No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)