FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004174598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12388167
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1064810.859537976845162No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA230740.18625838673308168No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG195490.15780381391371298No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)