FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004174604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11039556
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA241810.2190396063030071No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG206250.18682816591536833No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN114960.1041346228054824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)