FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004174778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11870685
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA314370.2648288620243904No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG261170.22001257720173686No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN231200.1947655084773962No Hit

[OK]Adapter Content

Adapter graph