FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004174867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11028550
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN629690.5709635446182861No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA182290.16528918126136255No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG170720.15479822823489942No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)