FastQCFastQC Report
Sat 1 Apr 2023
EGAF00004174912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16169507
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2028891.2547630549280198No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA247420.1530164154046255No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG191480.11842043174229121No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)