FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004174921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10976674
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN860980.784372388211584No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA189730.1728483509667865No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG186380.16979642467290182No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)