FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004174958

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174958
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12431477
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1526231.2277141324397736No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA221440.1781284717817521No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG212780.1711622842563277No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)