FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004174960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12419111
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1605131.2924677136712925No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA207850.16736302622627336No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG191290.1540287384499583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)