FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004174980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004174980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10487130
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN452590.43156707316491744No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA293740.2800956982510944No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG228150.2175523713351508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)