FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004175009

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175009
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8382338
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN444350.5301026992707762No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA170130.20296246703485352No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG125300.14948096819765558No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)