FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004175014

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175014
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11941439
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA413930.3466332658903169No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG369040.3090414815165911No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN127020.10636909002340504No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)