FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004175020

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175020
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11236314
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA212280.18892316466058176No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG199770.17778962033278886No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN126940.11297299096483064No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)