FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004175059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7285559
Sequences flagged as poor quality0
Sequence length35-150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA155260.21310650287781624No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG141360.19402766486415113No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN94790.13010669462700117No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)