FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004175144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9111343
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA150960.1656835880286803No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG125750.13801478003846412No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN102700.11271664341908762No Hit

[OK]Adapter Content

Adapter graph