FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004175145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9111343
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG155690.17087491931760226No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA115800.1270943262700131No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN98300.10788749803404393No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)