FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004175146

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175146
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8357609
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN291530.34881985984268943No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA140570.16819403731378196No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG114840.13740772031809576No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)