FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004175159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5421006
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN677981.2506534764949533No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG78670.1451206657952417No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA75890.1399924663429629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)