FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004175216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6042774
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN269730.4463678436426714No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA135890.22488016265377456No Hit
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG118260.1957048203358259No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)