FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004175331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004175331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7963892
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGG271620.34106439414296424No Hit
CCACTTGCAGTAGGAATATGACCCTAACCAGAAGACTCAGTGGATCCTTA251390.31566224152713274No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN138830.17432431278575852No Hit
TGTTTCGGTCTGCAACGGGAACACGATATTGCGATTCAATTCTTCCAGAG109160.13706865939417562No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)