Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004176367 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3960147 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCTCTCGTCATCTCGTATG | 43679 | 1.1029641071404672 | TruSeq Adapter, Index 1 (97% over 35bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTCTCGTCATCTCGTAT | 5111 | 0.1290608656698855 | TruSeq Adapter, Index 1 (97% over 36bp) |
CCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCGCACTGGAC | 4538 | 0.11459170581294077 | No Hit |