FastQCFastQC Report
Tue 28 Jun 2022
EGAF00004177063

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004177063
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences529487640
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGGGAAACTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT39413090.7443627957018978No Hit
CCTGGGAAACTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA29134810.5502453277285189No Hit
CCTGGGAAACTGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC11252740.21252129700326905No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)