FastQCFastQC Report
Mon 30 May 2022
EGAF00004177066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004177066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences520215957
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCTCCCAGGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT37670090.7241240775703465No Hit
TACCTCCCAGGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA21306640.40957298047664464No Hit
TACCTCCCAGGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC9219400.17722255297908904No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTATG6047800.11625556499413571TruSeq Adapter, Index 7 (97% over 34bp)
TACCTCCCAGGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5455300.10486606430644341No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)