FastQCFastQC Report
Mon 30 May 2022
EGAF00004177070

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004177070
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517881245
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTATG32346030.6245839236753978TruSeq Adapter, Index 7 (97% over 34bp)
AGTGATTAGCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT22756290.4394113557829266No Hit
AGTGATTAGCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA11858850.22898782519146835No Hit
AGTGATTAGCAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC9685530.18702221973688196No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)