Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004177179 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3509248 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTTGCGTTTCCTCCATGTTGGAGGGTGTCGGAATAGAGTCTGAGAAGCAG | 8823 | 0.251421387146192 | No Hit |
CTGGGAGTCATGCAGGAATGAATACTTCTGGTCCTTTGGGATATAGGTTT | 4661 | 0.1328204789174205 | No Hit |
GTCTGCTTGAGGATCTGCCCAGTCCGGCGGCTGCCGTCTTCCAGCCTCCC | 4643 | 0.13230754851181792 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTCATTATCTCGTAT | 4423 | 0.12603839911000875 | TruSeq Adapter, Index 2 (97% over 37bp) |
GTCGGAATAGAGTCTGAGAAGCAGAAGGAGGTCTGGGAGTCATGCAGGAA | 3768 | 0.1073734315728042 | No Hit |
CTTTGGGATATAGGTTTCTTCAAACTCCTGGTAGGTGTCAATGGCCAGCT | 3680 | 0.10486577181208054 | No Hit |