Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004177181 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3358950 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTTGCGTTTCCTCCATGTTGGAGGGTGTCGGAATAGAGTCTGAGAAGCAG | 8089 | 0.2408193036514387 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTCATTATCTCGTAT | 4598 | 0.13688801560011313 | TruSeq Adapter, Index 2 (97% over 37bp) |
GTCTGCTTGAGGATCTGCCCAGTCCGGCGGCTGCCGTCTTCCAGCCTCCC | 4282 | 0.1274803137885351 | No Hit |
CTGGGAGTCATGCAGGAATGAATACTTCTGGTCCTTTGGGATATAGGTTT | 4060 | 0.1208711055538189 | No Hit |