Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004177297 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3845724 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCACACGTCTGAACTCCAGTCACAGCGATAGATCTCGTATG | 10833 | 0.28168948161646545 | TruSeq Adapter, Index 1 (97% over 35bp) |
GTTGCGTTTCCTCCATGTTGGAGGGTGTCGGAATAGAGTCTGAGAAGCAG | 7925 | 0.2060730307219135 | No Hit |
GTCGGAATAGAGTCTGAGAAGCAGAAGGAGGTCTGGGAGTCATGCAGGAA | 3994 | 0.10385560690262745 | No Hit |
CTGGGAGTCATGCAGGAATGAATACTTCTGGTCCTTTGGGATATAGGTTT | 3909 | 0.10164535988542081 | No Hit |