FastQCFastQC Report
Mon 18 Sep 2023
EGAF00004196584

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004196584
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31568759
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT596700.189015982541474No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT355120.11249095981251592No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)