FastQCFastQC Report
Sat 16 Sep 2023
EGAF00004196590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004196590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38830721
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT1071460.275931008337445No Hit
CGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT616620.15879694842647912No Hit
CCGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCT425780.10965029467261245No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)