FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004198248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004198248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences273563996
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG3908900.06.619673140-144
GCGTCGT4076100.06.5735307140-144
AGCGTCG4369250.06.5672026140-144
CAAAAAT11509700.06.44534441
CGTGTAG4220800.06.380925140-144
GAGCGTC4805000.06.3474565140-144
GTCGTGT3832000.06.344411140-144
TCGTGTA3674600.06.292867140-144
GATCGGA7033500.06.287259140-144
AGAGCGT5154300.06.229088140-144
ATCGGAA6821350.06.2079406140-144
AGATCGG7461800.06.2006083140-144
TCGGAAG6598050.06.192806140-144
CGGAAGA6401250.06.102224140-144
AAGAGCG5631150.06.04504140-144
TAGATCG1934400.05.911478140-144
CAGATCG2116100.05.454924140-144
TGCACCG1460450.05.329374140-144
CTAAAAT6073300.05.2176151
GCACCGT1418250.05.176238140-144
Produced by FastQC (version 0.11.5)