FastQCFastQC Report
Tue 7 Feb 2023
EGAF00004198524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004198524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119436581
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAGATCTCGCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGC3821590.3199681343858964No Hit
ATAGATCTCGCAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTG2137250.17894433866957393No Hit
ATAGATCTCGCACAACTGTGTTCACTAGCAACCTCAAACAGACACCATGG1755560.14698679293239314No Hit
ATAGATCTCGACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCA1587920.13295089215589653No Hit
ATAGATCTCGCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTG1467600.12287692662602256No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)