FastQCFastQC Report
Fri 24 Mar 2023
EGAF00004198594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004198594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63212164
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGA2501020.3956548616180899No Hit
GACCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAG1365980.21609448459951475No Hit
GACAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGAC889480.1407134234480566No Hit
GAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGACTC702170.11108146843382864No Hit
GACACAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTG651600.10308142591036751No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)