FastQCFastQC Report
Tue 28 Mar 2023
EGAF00004198608

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004198608
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46360968
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTT2876910.6205457142309885No Hit
ATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTA1372010.29594075775121864No Hit
ATCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTC706290.1523458267739362No Hit
ATGGATGAACGAGATTCCCACTGTCCCTACCTACTATCCAGCGAAACCAC654190.1411079250976813No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN581730.12547839812145423No Hit
ATCTCGGCTCGTGCGTCGATGAAGAACGCAGCTAGCTGCGAGAATTAATG494430.10664790260634764No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)