FastQCFastQC Report
Fri 6 Jan 2023
EGAF00004198632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004198632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19068672
Sequences flagged as poor quality0
Sequence length32-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGACTC643480.3374540188220763No Hit
CACAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGAC625260.32789907970518345No Hit
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC439980.23073447380079745No Hit
GTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGACTCCTGAGGA401140.21036598668223985No Hit
CAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAA282970.14839523171828642No Hit
CTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTC202670.10628427611529528No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)