FastQCFastQC Report
Sun 2 Apr 2023
EGAF00004455705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004455705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21530030
Sequences flagged as poor quality0
Sequence length50-120
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG292340.13578243969005152No Hit
GGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCA226100.10501611005651176No Hit
ACATCTCCTTCCCAGCCACTGGCTGCCAGAAACTCATTGAAGTGGACGAT218700.10157905028464892No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)