FastQCFastQC Report
Mon 6 Mar 2023
EGAF00004455714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004455714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87760173
Sequences flagged as poor quality0
Sequence length50-120
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGGTGCGCCGGTGAGGGTGAAGGGTTTACCCCGTAAGCTCATGCCGG1960000.22333593166458324No Hit
CAACGTTATCGTCACAGCCCATGCATTTGTAATAATCTTCTTCATAGTAA1094450.1247091889848485No Hit
GAGAAGGTGCGCCGGTGAGGGTGAAGGGTTTACCCCGTAAGCTCATGCCG1011290.1152333644556512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)