FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004455792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004455792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14154503
Sequences flagged as poor quality0
Sequence length50-120
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCA284760.20117979416161771No Hit
TATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGC217250.15348472496702992No Hit
TGGTGGTCGTACGCTGTGAAGGCATCAACATTTCTGGCAATTTCTACAGA217220.1534635302984499No Hit
CAACGTTATCGTCACAGCCCATGCATTTGTAATAATCTTCTTCATAGTAA205240.1449997926454924No Hit
CGGTAATGCTGGTGGTCTGCATCACCACCGGATCAACTTCGACAAATACC148950.10523152949983479No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)