FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004455917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004455917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17718216
Sequences flagged as poor quality0
Sequence length75
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA7409664.181944728521201No Hit
CCTCCACCCGCCCTCCCTTCCCCCGCCGCCCCTCCTCCTCCTCCCCGGAGGGGGCGGGCTCCGGCGGGTGCGGGG214440.12102798611327462No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)