FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004457414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004457414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences754405
Sequences flagged as poor quality0
Sequence length151
%GC49

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCGCTGTTATCTCGTAT33710.44684221339996416TruSeq Adapter, Index 10 (97% over 38bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)